Genomics
4 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:CBG02581a.1 | CBG02581a.1 | [unknown] | |
| Transcript:CBG02581b.1 | CBG02581b.1 | [unknown] | |
| Transcript:CBG02581d.1 | CBG02581d.1 | [unknown] | |
| Transcript:CBG02581c.1 | CBG02581c.1 | [unknown] |
Other
4 CDSs
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| CDS:CBG02581b | CBG02581b | [unknown] | |
| CDS:CBG02581c | CBG02581c | [unknown] | |
| CDS:CBG02581a | CBG02581a | [unknown] | |
| CDS:CBG02581d | CBG02581d | [unknown] |
28 Allele
| Public Name |
|---|
| WBVar00107503 |
| WBVar00107502 |
| WBVar00107501 |
| WBVar00107500 |
| WBVar00107514 |
| WBVar00107513 |
| WBVar00107512 |
| WBVar00107511 |
| WBVar00107510 |
| WBVar00107509 |
| WBVar00107508 |
| WBVar00107507 |
| WBVar00107506 |
| WBVar00107505 |
| WBVar00107504 |
| WBVar00107516 |
| WBVar00107515 |
| WBVar00107489 |
| WBVar00107495 |
| WBVar00107494 |
| WBVar00107493 |
| WBVar00107492 |
| WBVar00107491 |
| WBVar00107490 |
| WBVar00107499 |
| WBVar00107498 |
| WBVar00107497 |
| WBVar00107496 |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in day 9 adults of C.briggsae AF16 comparing to in day 6 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day9_vs_Day6_upregulated | |
| Transcripts that showed significantly decreased expression in day 6 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day6_vs_Day1_downregulated |
2 Expression Patterns
| Remark | Reporter Gene | Primary Identifier | Pattern | Subcellular Localization |
|---|---|---|---|---|
| Cbr-abts-3, CAAAAACTCTTCTCAACGGTGGTATTCTTGTATTTTGCGTGTCTTCTTCCAGCAATTGCA, WBGene00025607 | Expr1068853 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012 | ||
| CBG02579, CTGTACGAAGAACGAGTACGTCGTCCAGTTGTAAGATGGCAGAGTATGAAAGAAGATGGA, WBGene00025606 | Expr1069421 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012 |
