WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00025421 Gene Name  Cbr-dsh-1
Sequence Name  ? CBG02352 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in Wnt signaling pathway and intracellular signal transduction. Is an ortholog of C. elegans dsh-1. In C. elegans, dsh-1 is involved in Wnt signaling pathway, regulating spindle positioning. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG02352a.1 CBG02352a.1   [unknown]
Transcript:CBG02352b.1 CBG02352b.1   [unknown]
Transcript:CBG02352c.1 CBG02352c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG02352c CBG02352c   [unknown]
CDS:CBG02352b CBG02352b   [unknown]
CDS:CBG02352a CBG02352a   [unknown]

0 RNAi Result

21 Allele

Public Name
WBVar00141744
WBVar00141741
WBVar00141742
WBVar00141743
WBVar00107249
WBVar00107248
WBVar00107247
WBVar00107246
WBVar00107245
WBVar00107253
WBVar00107252
WBVar00107251
WBVar00107250
WBVar00107259
WBVar00107258
WBVar00107257
WBVar00107256
WBVar00107255
WBVar00107254
WBVar00107261
WBVar00107260

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG02351, CACCATCGAATGGAAATGTACAGTATGATGATAGTTCAACGATCTACGAGGGATCCAACA, WBGene00025420   Expr1058729 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-dsh-1, AAATATCAATGGACGATGGGAATGAATGGAATGTCTGCTGGAAATGGTAGTTCTGTGATG, WBGene00025421   Expr1069537 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region