WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00024235 Gene Name  Cbr-pir-1
Sequence Name  ? CBG00927 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in protein dephosphorylation. Is an ortholog of C. elegans pir-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00927.1 CBG00927.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00927 CBG00927   [unknown]

0 RNAi Result

23 Allele

Public Name
WBVar00141506
WBVar00141507
WBVar00065292
WBVar00065297
WBVar00065302
WBVar00041407
WBVar00065307
WBVar00065372
WBVar00065342
WBVar00065312
WBVar00065377
WBVar00065347
WBVar00065317
WBVar00065382
WBVar00065352
WBVar00065322
WBVar00065387
WBVar00065357
WBVar00065327
WBVar00065362
WBVar00065332
WBVar00065367
WBVar00065337

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-pir-1, ACACTGTACACATGGGCTCAATCGAACGGGCTATCTGATTTGTCGATATATGATAGATAT, WBGene00024235   Expr1067763 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region