WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00024204 Gene Name  Cbr-daf-19
Sequence Name  ? CBG00885 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans daf-19. In C. elegans, daf-19 is involved in several processes, including defense response to Gram-negative bacterium; male mating behavior; and positive regulation of transcription by RNA polymerase II. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00885a.1 CBG00885a.1   [unknown]
Transcript:CBG00885b.1 CBG00885b.1   [unknown]
Transcript:CBG00885c.1 CBG00885c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00885c CBG00885c   [unknown]
CDS:CBG00885b CBG00885b   [unknown]
CDS:CBG00885a CBG00885a   [unknown]

0 RNAi Result

24 Allele

Public Name
WBVar00135653
WBVar00135654
WBVar00135655
WBVar00135633
WBVar00135634
WBVar00135635
WBVar00135636
WBVar00135637
WBVar00135638
WBVar00135639
WBVar00135640
WBVar00135641
WBVar00135642
WBVar00135643
WBVar00135644
WBVar00135645
WBVar00135646
WBVar00135647
WBVar00135648
WBVar00135649
WBVar00135650
WBVar00135651
WBVar00135652
WBVar00015814

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-daf-19, AATCACTGTCACCCGCCAAGACAAGGATTGGCCGCTGGCCAAAGAGGCCAAAGAGTACAT, WBGene00024204   Expr1058115 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region