WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023874 Gene Name  Cbr-mrp-8
Sequence Name  ? CBG00495 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans mrp-8. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00495.1 CBG00495.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00495 CBG00495   [unknown]

0 RNAi Result

59 Allele

Public Name
WBVar00030359
WBVar00030354
WBVar00030369
WBVar00030364
WBVar00030374
WBVar00030379
WBVar00030384
WBVar00030389
WBVar00030329
WBVar00030324
WBVar00030339
WBVar00030334
WBVar00030349
WBVar00030344
WBVar00030394
WBVar00030399
WBVar00141308
WBVar00141309
WBVar00141304
WBVar00141305
WBVar00141306
WBVar00141307
WBVar00141300
WBVar00141301
WBVar00141302
WBVar00141303
WBVar00141333
WBVar00141334
WBVar00141330
WBVar00141331

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-mrp-8, TCAAAGAGCCATTCGACAACACTTTCCCAAATCCACGACAATTTCCATTGCTCATCGTTT, WBGene00023874   Expr1068929 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG00493, TCATTCCAGTCTACACAAGAATCGTGAGGAATAATGAGCCGGAATTGAGAGCTCCCAAGT, WBGene00023872   Expr1060426 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG00494, GCGTCATCGCCGAGCTAATACTACTCATGGCTGAAACTGCACTGTTGTCAAAATCGACAA, WBGene00023873   Expr1062140 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  located_in
  enables
  enables
  enables
  involved_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  located_in
  enables
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region