WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023690 Gene Name  Cbr-ttx-3
Sequence Name  ? CBG00265 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA binding activity. Is an ortholog of C. elegans ttx-3. In C. elegans, ttx-3 is involved in several processes, including olfactory learning; regulation of developmental process; and response to temperature stimulus. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00265.1 CBG00265.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00265 CBG00265   [unknown]

0 RNAi Result

18 Allele

Public Name
WBVar00060858
WBVar00060828
WBVar00060798
WBVar00060833
WBVar00060803
WBVar00060773
WBVar00060838
WBVar00060808
WBVar00060778
WBVar00060843
WBVar00060813
WBVar00060783
WBVar00060848
WBVar00060818
WBVar00060788
WBVar00060853
WBVar00060823
WBVar00060793

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ttx-3, AAAATGCTCGTGCCAAATTCCGCCGGGGACTTCAAGATGGTGGTCGGCCCGGAAGCCCAA, WBGene00023690   Expr1057313 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region