WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077160 Phenotype Remark  RNA pol II CTD Ser2 phosphorylation is reduced to background levels. (Note- in a separate experiment the authors determined however that CTD Ser5 phosphorylation was the same as wild type).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000410 cdk-9 H25P06.2 Caenorhabditis elegans
WBGene00005014 spt-4 F54C4.2 Caenorhabditis elegans
WBGene00005015 spt-5 K08E4.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H25P06.2a H25P06.2a 1338   I: 11323532-11323581
CDS:F54C4.2 F54C4.2 363   III: 69226-69430
CDS:H25P06.2b H25P06.2b 1437   I: 11323532-11323581
CDS:K08E4.1 K08E4.1 3627   IV: 12051497-12051544

1 Laboratories

Primary Identifier
LD

1 Phenotype

Identifier Name Description
WBPhenotype:0001351 protein phosphorylation reduced Animals exhibit decreased levels of protein phosphorylation compared to that observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005411

0 Strain