WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00222317 Gene Name  Bm2056
Sequence Name  ? Bm2056 Organism  Brugia malayi
Automated Description  Is predicted to encode a protein with the following domains: CLASP N-terminal domain; CLASP N terminal; Armadillo-like helical; TOG domain; and Armadillo-type fold. Is an ortholog of C. elegans cls-1; cls-2; and cls-3. In C. elegans, cls-2 is involved in several processes, including cytoplasmic streaming; microtubule cytoskeleton organization; and nuclear chromosome segregation. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm2056b.1 Bm2056b.1   [unknown]
Transcript:Bm2056b.2 Bm2056b.2   [unknown]
Transcript:Bm2056a.1 Bm2056a.1   [unknown]
Transcript:Bm2056d.1 Bm2056d.1   [unknown]
Transcript:Bm2056c.1 Bm2056c.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm2056a Bm2056a   [unknown]
CDS:Bm2056b Bm2056b   [unknown]
CDS:Bm2056c Bm2056c   [unknown]
CDS:Bm2056d Bm2056d   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in male B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_M120_vs_M30
  Transcripts that showed significantly decreased expression in male B. malayi 42 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M42_vs_M30

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region