WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00203499 Gene Name  Ppa-anat-1
Sequence Name  ? PPA30632 Organism  Pristionchus pacificus
Automated Description  Is predicted to encode a protein with the following domains: Est1 DNA/RNA binding domain; Tetratricopeptide-like helical domain superfamily; DNA/RNA-binding domain, Est1-type; and Acyl-CoA N-acyltransferase. Is an ortholog of C. elegans anat-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA30632.1 PPA30632.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA30632 PPA30632   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Protein that contains phosphorylation site according to nano-HPLC and mass spectrometry on enriched phosphopeptides. The database search results were parsed by MaxQuant to assemble protein groups, peptides, and phosphorylation sites at a false discovery rate of 1%. All phosphorylation events having a reported localization probability of at least 0.75 were considered as localized (assigned to a specific amino acid). WBPaper00041472:Phosphorylated_protein
Yeast culture: C.albidus Transcripts that showed significantly increased expression after fed with yeast culture C.albidus, comparing to fed with OP50. Cuffdiff (version 2.0.1) WBPaper00050265:C.albidus_vs_OP50_upregulated
Yeast culture: C.albidus Transcripts that showed significantly decreased expression after fed with yeast culture C.albidus, comparing to fed with OP50. Cuffdiff (version 2.0.1) WBPaper00050265:C.albidus_vs_OP50_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region