WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00072768 Gene Name  Cre-lin-54
Sequence Name  ? CRE10288 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Tesmin/TSO1-like CXC domain; CRC domain; Lin-54 family; and Tesmin/TSO1-like CXC domain, cysteine-rich domain. Is an ortholog of C. elegans lin-54. In C. elegans, lin-54 is involved in negative regulation of vulval development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE10288.1 CRE10288.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE10288 CRE10288   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-lin-54, GAGTTCGGTCGCTGTCTCGAACAAATGATTACTAATACTACCGAAGCTACAATTGGACTT, WBGene00072768   Expr1107465 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region