WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033850 Gene Name  Cbr-pgam-5
Sequence Name  ? CBG13006 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Histidine phosphatase superfamily, clade-1; Histidine phosphatase superfamily; and Histidine phosphatase superfamily (branch 1). Is an ortholog of C. elegans pgam-5. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13006a.1 CBG13006a.1   [unknown]
Transcript:CBG13006b.1 CBG13006b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13006b CBG13006b   [unknown]
CDS:CBG13006a CBG13006a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-pgam-5, AAAAGTTCTTCATCGCTTATCGAAGAAGGACCACCATATCCACCTGTGCCAGATCATAAG, WBGene00033850   Expr1052344 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region