WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00134208 Gene Name  CJA15004
Sequence Name  ? CJA15004 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Immunoglobulin I-set; Immunoglobulin subtype 2; Fibronectin type III domain; Immunoglobulin subtype; Immunoglobulin-like fold; Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin-like domain superfamily; and Fibronectin type III. Is an ortholog of C. elegans unc-89. In C. elegans, unc-89 is involved in several processes, including myofibril assembly; nematode pharyngeal gland morphogenesis; and regulation of striated muscle contraction. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA15004.3 CJA15004.3   [unknown]
Transcript:CJA15004.2 CJA15004.2   [unknown]
Transcript:CJA15004.1 CJA15004.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA15004 CJA15004   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA24761, AAAGAACATGAGAAAAACAAGTTTTCATTTCAGGAGACCGCTCCATCGGACTCCGACCAC, WBGene00180333   Expr1076116 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-unc-89, CAAGGCACCAAAAGTTATCGAGCCACTGGAGAACGTGCGAATCCCCGAGAAGCAAGGATT, WBGene00126725   Expr1076076 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA15004, CATTGGACAGTATCAGTGTATTGCGAAGAACGAGTATGGAGACGCTCAGCAGAACATTCT, WBGene00134208   Expr1082393 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region