WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00130851 Gene Name  Cjp-smgl-2
Sequence Name  ? CJA11647 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Helicase associated domain (HA2); Helicase, C-terminal; Helicase superfamily 1/2, ATP-binding domain; Helicase conserved C-terminal domain; Helicase-associated domain; P-loop containing nucleoside triphosphate hydrolase; Domain of unknown function DUF1605; and Oligonucleotide/oligosaccharide-binding (OB)-fold. Is an ortholog of C. elegans smgl-2. In C. elegans, smgl-2 is involved in nuclear-transcribed mRNA catabolic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA11647.1 CJA11647.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA11647 CJA11647   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-smgl-2, TGATGTGCCCTCCGACTAGAGATATGGTGGAAGAAGCGGAGAAGAATGAGGAGAAAAAGA, WBGene00130851   Expr1074639 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA23888, AAAAACATCGTGGAGCACTTTTCAGACATTTCCTACCCGATGAGCCGAATACGAGCAAAG, WBGene00179460   Expr1077346 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region