WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00127933 Gene Name  Cjp-mec-5
Sequence Name  ? CJA08729 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Collagen triple helix repeat and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans mec-5. In C. elegans, mec-5 is involved in positive regulation of multicellular organismal process and response to mechanical stimulus. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08729b.1 CJA08729b.1   [unknown]
Transcript:CJA08729a.1 CJA08729a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08729b CJA08729b   [unknown]
CDS:CJA08729a CJA08729a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-mec-5, CATCCGGAATCGGAGGAAACGAAGAACAATTTGCATTGAAAGTTCACGCGTGTTGCCGAT, WBGene00127933   Expr1089012 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region