WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00124616 Gene Name  Cjp-sds-22
Sequence Name  ? CJA05412 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Leucine-rich repeat, typical subtype; Leucine rich repeat 4; Leucine Rich repeats (2 copies); U2A'/phosphoprotein 32 family A, C-terminal; and Leucine-rich repeat domain superfamily. Is an ortholog of C. elegans sds-22. In C. elegans, sds-22 is involved in negative regulation of centriole replication. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA05412.1 CJA05412.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA05412 CJA05412   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA05412, TATTTCCACGACGTCAATCAGTATCGTAGGAAAGTTATGCTGACACTCACGCAAGTTACT, WBGene00124616   Expr1076003 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA23359, CAATCAGCCCAGCCATCTCTTCGCTTGTCAACTTAACGTCACTGGATTTGTATGAAAATC, WBGene00178931   Expr1080763 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region