WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00133438 Gene Name  Cjp-mks-5
Sequence Name  ? CJA14234 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: RPGRIP1 family; RPGR-interacting protein 1, first C2 domain; C2 domain superfamily; and First C2 domain of RPGR-interacting protein 1. Is an ortholog of C. elegans mks-5. In C. elegans, mks-5 is involved in several processes, including non-motile cilium assembly; protein localization to cilium; and protein to membrane docking. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA14234b.1 CJA14234b.1   [unknown]
Transcript:CJA14234a.1 CJA14234a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA14234a CJA14234a   [unknown]
CDS:CJA14234b CJA14234b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA14234, CTCACTCTGATCAAAAAGAGTCCAGGAGACGAGGAAGAACTTGCTTATGGAGTTTTTTCT, WBGene00133438   Expr1084228 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region