WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00272087 Gene Name  PPA33718
Sequence Name  ? PPA33718 Organism  Pristionchus pacificus
Automated Description  Is predicted to encode a protein with the following domains: NAD(P)-binding domain superfamily; Short-chain dehydrogenase/reductase SDR; and short chain dehydrogenase. Is an ortholog of C. elegans let-767 and members of the C. elegans stdh gene class including stdh-4. In C. elegans, let-767 is involved in several processes, including establishment or maintenance of epithelial cell apical/basal polarity; long-chain fatty acid biosynthetic process; and steroid metabolic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA33718.1 PPA33718.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA33718 PPA33718   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in Ppa-sul-2(tu1069) animals comparing to in wild type PS312 animals at J4.12 stage. DESeq244(version 1.18.1) with two criteria, P-value < 0.05 and Fold change > 2. WBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Up
  Transcripts that showed significantly increased expression in Ppa-sul-2(tu1069) animals comparing to in wild type PS312 animals at 4M1 stage. DESeq244(version 1.18.1) with two criteria, P-value < 0.05 and Fold change > 2. WBPaper00064862:Ppa-sul-2(tu1069)_4M3_Up

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region