WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00097157 Gene Name  PPA07603
Sequence Name  ? PPA07603 Organism  Pristionchus pacificus
Automated Description  Is predicted to encode a protein with the following domains: von Willebrand factor type A domain; von Willebrand factor A-like domain superfamily; and von Willebrand factor, type A. Is an ortholog of C. elegans C18H7.1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA07603.1 PPA07603.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA07603 PPA07603   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria infection: Serratia marcescens Pristionchus pacificus Genes with expression levels changed significantly after treatment of Serratia marcescens. Differential expression were calculated by empirical eBayes method using eBayes function. P_value <= 0.01 and log2 fold change > 1 were used to call differentially expressed genes in all datasets. WBPaper00041606:PP_S.marcescens_regulated
  Transcripts that showed significantly decreased expression in Ppa-sul-2(tu1069) animals comparing to in wild type PS312 animals at J4.12 stage. DESeq244(version 1.18.1) with two criteria, P-value < 0.05 and Fold change > 2. WBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Down

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region