WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00121210 Gene Name  Cjp-spv-1.2
Sequence Name  ? CJA02006 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: FCH domain and AH/BAR domain superfamily. Is an ortholog of C. elegans spv-1. In C. elegans, spv-1 is involved in several processes, including cell-cell junction assembly; negative regulation of smooth muscle contraction; and regulation of protein localization. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA02006b.1 CJA02006b.1   [unknown]
Transcript:CJA02006a.1 CJA02006a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA02006a CJA02006a   [unknown]
CDS:CJA02006b CJA02006b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA02006, CGGTGGATACGACGCCAGTGCTCAATATTATTGATCAGTTGGAATCAGCTGTTTTAAACA, WBGene00121210   Expr1087959 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA21569, GCAGTGTCACAGACTCTTCAAAGGAGACACTCCACACATCAGACACACCAGGATCCAAAT, WBGene00177141   Expr1086227 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region