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parasitic vs free-living. |
Transcripts that showed significantly increased expression at parasitic female stage (collected from S. ratti-infected rats), comparing to free living female stage. |
Differentially expressed genes in all pairwise comparisons (parasitic vs. free-living; parasitic vs. iL3; and iL3 vs. free-living) were determined for S.ratti and S.stercoralis using the R (version 3.1.2) package edgeR version 3.6.8. Genes with less than one count per million reads were excluded. Genes were considered to be differentially expressed if the false discovery rate (FDR) was <= 0.001 and the fold change was >= 2. |
WBPaper00050919:up_parasitic_vs_free-living_mRNA
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parasitic vs free-living. |
Transcripts that showed significantly increased expression at infective third-stage larva stage, comparing to free living female stage. |
Differentially expressed genes in all pairwise comparisons (parasitic vs. free-living; parasitic vs. iL3; and iL3 vs. free-living) were determined for S.ratti and S.stercoralis using the R (version 3.1.2) package edgeR version 3.6.8. Genes with less than one count per million reads were excluded. Genes were considered to be differentially expressed if the false discovery rate (FDR) was <= 0.001 and the fold change was >= 2. |
WBPaper00050919:up_infective-L3_vs_free-living_mRNA
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parasitic vs free-living. |
Transcripts that showed significantly decreased expression at infective third-stage larva stage, comparing to parasitic female stage (collected from S. ratti-infected rats). |
Differentially expressed genes in all pairwise comparisons (parasitic vs. free-living; parasitic vs. iL3; and iL3 vs. free-living) were determined for S.ratti and S.stercoralis using the R (version 3.1.2) package edgeR version 3.6.8. Genes with less than one count per million reads were excluded. Genes were considered to be differentially expressed if the false discovery rate (FDR) was <= 0.001 and the fold change was >= 2. |
WBPaper00050919:down_infective-L3_vs_parasitic_mRNA
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S.ratti infection to permissive non-natural host gerbils instead of natural host rats. |
Transcriptions that showed differential expression after S.ratti infected rat (natural host) vs. gerbil (permissive non-natural host). |
CuffDisff (version 2.0.1), FDR < 0.05. |
WBPaper00050725:Rat_vs_Gerbil-infection_regulated
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