WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00263687 Gene Name  SRAE_2000346500
Sequence Name  ? SRAE_2000346500 Organism  Strongyloides ratti
Automated Description  Is predicted to encode a protein with the following domains: Heat shock chaperonin-binding; STI1 domain; Tetratricopeptide-like helical domain superfamily; Tetratricopeptide repeat 2; TPR repeat; and Tetratricopeptide repeat. Is an ortholog of C. elegans sti-1. In C. elegans, sti-1 is involved in determination of adult lifespan and response to heat. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Strongyloides ratti 34506

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:SRAE_2000346500.1 SRAE_2000346500.1   [unknown]
Transcript:SRAE_2000346500.2 SRAE_2000346500.2   [unknown]
Transcript:SRAE_2000346500.3 SRAE_2000346500.3   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:SRAE_2000346500 SRAE_2000346500   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
parasitic vs free-living. Proteins that showed significantly increased expression at parasitic female stage (collected from S. ratti-infected rats), comparing to free living female stage. Significant differences were analyzed statistically by ANOVA. Q-values are adjusted P values and were calculated by Progenesis based on an optimized false discovery (FDR) approach. A protein was considered to be differentially expressed if q < 0.05. WBPaper00050919:up_parasitic_vs_free-living_protein

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region