WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00220834 Gene Name  Bm573
Sequence Name  ? Bm573 Organism  Brugia malayi
Automated Description  Is predicted to encode a protein with the following domain: SMAD/FHA domain superfamily. Is an ortholog of O. volvulus OVOC13504. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

6 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm573b.1 Bm573b.1   [unknown]
Transcript:Bm573a.1 Bm573a.1   [unknown]
Transcript:Bm573c.1 Bm573c.1   [unknown]
Transcript:Bm573d.1 Bm573d.1   [unknown]
Transcript:Bm573d.2 Bm573d.2   [unknown]
Transcript:Bm573d.3 Bm573d.3   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm573b Bm573b   [unknown]
CDS:Bm573c Bm573c   [unknown]
CDS:Bm573d Bm573d   [unknown]
CDS:Bm573a Bm573a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120
  Transcripts that showed significantly higher expression in L4 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Adult_Upregulated
  Transcripts that showed significantly decreased expression in female B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_F120_vs_F30

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region