WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00042930 Gene Name  CBG24936
Sequence Name  ? CBG24936 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Cyclin-dependent kinase 2-associated protein 1/2 and Cyclin-dependent kinase 2-associated protein. Is an ortholog of C. elegans Y43F4B.10. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG24936a.2 CBG24936a.2   [unknown]
Transcript:CBG24936a.1 CBG24936a.1   [unknown]
Transcript:CBG24936b.1 CBG24936b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG24936b CBG24936b   [unknown]
CDS:CBG24936a CBG24936a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in day 9 adults of C.briggsae AF16 comparing to in day 6 adults of AF16. DESeq2, p < 0.01, fold change > 2. WBPaper00068053:CBG_Day9_vs_Day6_downregulated

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG24936, CAAACCGAGGCCGAAAACGACAAAAAGAAGGCGGACGCGGCGGCCGAAGCGGCCAGAATC, WBGene00042930   Expr1066467 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region