WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035809 Gene Name  Cbr-gcn-1
Sequence Name  ? CBG15647 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: TOG domain; Translational activator Gcn1; Armadillo-like helical; and Armadillo-type fold. Is an ortholog of C. elegans gcn-1. In C. elegans, gcn-1 is involved in regulation of apoptotic process and regulation of translation. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG15647.1 CBG15647.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG15647 CBG15647   [unknown]

0 RNAi Result

44 Allele

Public Name
WBVar00122850
WBVar00122852
WBVar00122851
WBVar00122854
WBVar00122853
WBVar00122856
WBVar00122855
WBVar00122858
WBVar00122857
WBVar00122859
WBVar00122841
WBVar00122840
WBVar00122843
WBVar00122842
WBVar00122845
WBVar00122844
WBVar00122847
WBVar00122846
WBVar00122849
WBVar00122848
WBVar00122861
WBVar00122860
WBVar00122863
WBVar00122862
WBVar00122865
WBVar00122864
WBVar00122867
WBVar00122866
WBVar00122869
WBVar00122868

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG15647, GGCAGTTCGTCTCTCGAAACCATCCGCAGCACTGACAACCGCATTCAAAGAGGCATCAAA, WBGene00035809   Expr1066340 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG15645, ATATCTATTCGCTAACAGAGAACAAGGATATGGAGCCTTATCTGGCTCATATGGTTCCAG, WBGene00035808   Expr1065470 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region