WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036595 Gene Name  Cbr-vps-52
Sequence Name  ? CBG16730 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Vps52 and Vps52 / Sac2 family. Is an ortholog of C. elegans vps-52. In C. elegans, vps-52 is involved in negative regulation of dense core granule transport; positive regulation of dense core granule transport; and positive regulation of locomotion involved in locomotory behavior. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16730.1 CBG16730.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16730 CBG16730   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00017999
WBVar00124280
WBVar00124281
WBVar00124284
WBVar00124285
WBVar00124282
WBVar00124283
WBVar00124279

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-vps-52, AGCCAGCAGTGGACAGTATCAATTCCGAATGCATTCAACTCTTCACAAACTTCAGTCTCG, WBGene00036595   Expr1065289 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region