WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00031911 Gene Name  Cbr-denn-4
Sequence Name  ? CBG10547 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: dDENN domain; Tetratricopeptide-like helical domain superfamily; DENN (AEX-3) domain; Pentatricopeptide repeat; DENN domain, C-terminal lobe; cDENN domain; and uDENN domain. Is an ortholog of C. elegans denn-4. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10547a.1 CBG10547a.1   [unknown]
Transcript:CBG10547b.1 CBG10547b.1   [unknown]
Transcript:CBG10547c.1 CBG10547c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10547c CBG10547c   [unknown]
CDS:CBG10547b CBG10547b   [unknown]
CDS:CBG10547a CBG10547a   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00012202

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG10547, TTCGGTGAATAAGAATATGCTATTCAAAGCGGTTCAGGAGTTGGTCAACTCGTCGAGACT, WBGene00031911   Expr1066393 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region