WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036316 Gene Name  Cbr-osm-1
Sequence Name  ? CBG16355 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: WD40/YVTN repeat-like-containing domain superfamily; Tetratricopeptide-like helical domain superfamily; WD40-repeat-containing domain superfamily; and WD40 repeat. Is an ortholog of C. elegans osm-1. In C. elegans, osm-1 is involved in dauer entry and non-motile cilium assembly. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16355.1 CBG16355.1   [unknown]
Transcript:CBG16355.2 CBG16355.2   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16355 CBG16355   [unknown]

0 RNAi Result

20 Allele

Public Name
WBVar00056003
WBVar00123820
WBVar00123822
WBVar00123821
WBVar00123824
WBVar00123823
WBVar00123825
WBVar00024859
WBVar00024829
WBVar00024799
WBVar00024834
WBVar00024804
WBVar00024839
WBVar00024809
WBVar00024844
WBVar00024814
WBVar00024849
WBVar00024819
WBVar00024854
WBVar00024824

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-osm-1, GCCATTGAAGAAGGAAGTGGAGAGCTTGTGGATTACAGTCCGTTCGAGAACAGTGACATT, WBGene00036316   Expr1061988 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region