WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032720 Gene Name  Cbr-ret-1
Sequence Name  ? CBG11624 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domain: Reticulon. Is an ortholog of C. elegans ret-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11624b.1 CBG11624b.1   [unknown]
Transcript:CBG11624c.1 CBG11624c.1   [unknown]
Transcript:CBG11624a.1 CBG11624a.1   [unknown]
Transcript:CBG11624d.1 CBG11624d.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11624d CBG11624d   [unknown]
CDS:CBG11624a CBG11624a   [unknown]
CDS:CBG11624c CBG11624c   [unknown]
CDS:CBG11624b CBG11624b   [unknown]

0 RNAi Result

14 Allele

Public Name
WBVar00117209
WBVar00117210
WBVar00117212
WBVar00117211
WBVar00020314
WBVar00020284
WBVar00020289
WBVar00020294
WBVar00020299
WBVar00020269
WBVar00020304
WBVar00020274
WBVar00020309
WBVar00020279

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG27216, CAACAAGCTGAAGAAGTTGATCCTTGTCGAGAGCCCATTGGAATCTATCAAATTCGGACT, WBGene00088630   Expr1067281 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-ret-1, ATCTTCACCACATCACTCGATTCTTAAGCATCATGGAGAGGCCTGGATTGACTTCAAGAC, WBGene00032720   Expr1068881 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region