Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:CBG08588.1 | CBG08588.1 | [unknown] |
Other
20 Allele
| Public Name |
|---|
| WBVar00113821 |
| WBVar00113820 |
| WBVar00113825 |
| WBVar00113824 |
| WBVar00113823 |
| WBVar00113822 |
| WBVar00113829 |
| WBVar00113828 |
| WBVar00113827 |
| WBVar00113826 |
| WBVar00113818 |
| WBVar00113817 |
| WBVar00113816 |
| WBVar00113819 |
| WBVar00113832 |
| WBVar00113831 |
| WBVar00113830 |
| WBVar00113835 |
| WBVar00113834 |
| WBVar00113833 |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in day 9 adults of C.briggsae AF16 comparing to in day 6 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day9_vs_Day6_upregulated | |
| Transcripts that showed significantly increased expression in day 9 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day9_vs_Day1_upregulated |
2 Expression Patterns
| Remark | Reporter Gene | Primary Identifier | Pattern | Subcellular Localization |
|---|---|---|---|---|
| CBG08588, AAACGAACAAGATGCGAGAATATGGATTGATACCGCCAGAGCAGACTGTGTGGATACTTT, WBGene00030349 | Expr1060487 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012 | ||
| CBG08587, CTTCAACGTCAAGAAGGATCGGACTCGAACATCTCGAAGAAGATCAGGAGCAAACGACGC, WBGene00030348 | Expr1060571 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012 |
