WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00028463 Gene Name  Cbr-sms-1
Sequence Name  ? CBG06147 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Sphingomyelin synthase-like domain and PAP2 superfamily C-terminal. Is an ortholog of C. elegans sms-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG06147a.1 CBG06147a.1   [unknown]
Transcript:CBG06147b.1 CBG06147b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG06147b CBG06147b   [unknown]
CDS:CBG06147a CBG06147a   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00111274

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG26309, TGACGGTGGAGATTGTCGACGAAGATTCTGGGGAAATTCAAGTAGCCGAAAAAAGAACGG, WBGene00087723   Expr1063368 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-sms-1, CAATTGATGTCATTCTATCGTACTTCGCGTGTACACGAGTCTTCTGGGCATACCATACAC, WBGene00028463   Expr1054021 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region