WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00028384 Gene Name  Cbr-gtl-1
Sequence Name  ? CBG06044 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: SLOG in TRPM and TRPM, SLOG domain. Is an ortholog of C. elegans gtl-1. In C. elegans, gtl-1 is involved in defecation. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG06044.1 CBG06044.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG06044 CBG06044   [unknown]

0 RNAi Result

14 Allele

Public Name
WBVar00111224
WBVar00111225
WBVar00111222
WBVar00111223
WBVar00111226
WBVar00111227
WBVar00111214
WBVar00111217
WBVar00111218
WBVar00111215
WBVar00111216
WBVar00111219
WBVar00111220
WBVar00111221

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-gtl-1, AATTTTCCGATTTGGCAGTAGAAGTTCTCGAGTACTGTACCAAACACAGTCGTGACCAGA, WBGene00028384   Expr1064748 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region