WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034799 Gene Name  Cbr-rgs-7
Sequence Name  ? CBG14233 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Regulator of G protein signaling domain; RGS domain; and RGS domain superfamily. Is an ortholog of C. elegans rgs-7. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG14233c.1 CBG14233c.1   [unknown]
Transcript:CBG14233d.1 CBG14233d.1   [unknown]
Transcript:CBG14233a.1 CBG14233a.1   [unknown]
Transcript:CBG14233b.1 CBG14233b.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG14233c CBG14233c   [unknown]
CDS:CBG14233d CBG14233d   [unknown]
CDS:CBG14233a CBG14233a   [unknown]
CDS:CBG14233b CBG14233b   [unknown]

0 RNAi Result

16 Allele

Public Name
WBVar00002269
WBVar00002259
WBVar00002264
WBVar00002254
WBVar00121150
WBVar00121151
WBVar00121152
WBVar00121153
WBVar00121154
WBVar00121145
WBVar00121146
WBVar00121147
WBVar00121148
WBVar00121149
WBVar00121155
WBVar00029289

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Heat shock: 34C 30min. Transcripts that showed significantly increased expression in L2 larva stage C. briggsae animals after incubated in a 34C water bath for 30min. DESeq2 v 1.18.1, fold change > 2, FDR < 0.01. WBPaper00058955:heatshock_upregulated_CBG

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-rgs-7, GCAAACCGGATACCTTCGCATTGGCTCAGAATCGTGTCGAGCAACTCATGTCCAAGGACT, WBGene00034799   Expr1066208 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region