WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035835 Gene Name  CBG15683
Sequence Name  ? CBG15683 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: SAP domain and SAP domain superfamily. Is an ortholog of C. elegans Y53G8AR.6. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG15683.1 CBG15683.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG15683 CBG15683   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00002809
WBVar00122931
WBVar00122930
WBVar00122933
WBVar00122932
WBVar00122935
WBVar00122934
WBVar00122926
WBVar00122925
WBVar00122928
WBVar00122927
WBVar00122929
WBVar00029814

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in day 9 adults of C.briggsae AF16 comparing to in day 6 adults of AF16. DESeq2, p < 0.01, fold change > 2. WBPaper00068053:CBG_Day9_vs_Day6_downregulated

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG15683, TGTGGATGATGCGGAAATGGAGGCGAAAAAGAAGGCTCGATTGGAGAGATTTGGAAATGG, WBGene00035835   Expr1067544 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region