WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039219 Gene Name  Cbr-dnj-16
Sequence Name  ? CBG20164 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Chaperone J-domain superfamily and DnaJ domain. Is an ortholog of C. elegans dnj-16. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20164b.1 CBG20164b.1   [unknown]
Transcript:CBG20164a.1 CBG20164a.1   [unknown]
Transcript:CBG20164a.2 CBG20164a.2   [unknown]
Transcript:CBG20164c.1 CBG20164c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20164c CBG20164c   [unknown]
CDS:CBG20164a CBG20164a   [unknown]
CDS:CBG20164b CBG20164b   [unknown]

0 RNAi Result

15 Allele

Public Name
WBVar00049299
WBVar00018879
WBVar00128270
WBVar00128263
WBVar00128262
WBVar00128261
WBVar00128260
WBVar00128267
WBVar00128266
WBVar00128265
WBVar00128264
WBVar00128269
WBVar00128268
WBVar00128259
WBVar00128258

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-dnj-16, TTTTGGAGACCCGAAAACACTATATTGCTGTATATGGTGACAATTGGATAAGCGATGTGA, WBGene00039219   Expr1058323 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region