WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023772 Gene Name  Cbr-ifta-2
Sequence Name  ? CBG00375 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domain: P-loop containing nucleoside triphosphate hydrolase. Is an ortholog of C. elegans ifta-2. In C. elegans, ifta-2 is involved in several processes, including dauer larval development; determination of adult lifespan; and insulin-like growth factor receptor signaling pathway. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG00375b.1 CBG00375b.1   [unknown]
Transcript:CBG00375a.1 CBG00375a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG00375b CBG00375b   [unknown]
CDS:CBG00375a CBG00375a   [unknown]

0 RNAi Result

5 Allele

Public Name
WBVar00141184
WBVar00141185
WBVar00141186
WBVar00141187
WBVar00141188

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ifta-2, GAATCTGCTCAAATGAAGGTTGAGGTCAACGATTTCATGGCTTCAGTTCTTGGAATCGTC, WBGene00023772   Expr1050139 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region