Genomics
6 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:CBG21779a.1 | CBG21779a.1 | [unknown] | |
| Transcript:CBG21779b.1 | CBG21779b.1 | [unknown] | |
| Transcript:CBG21779c.1 | CBG21779c.1 | [unknown] | |
| Transcript:CBG21779d.1 | CBG21779d.1 | [unknown] | |
| Transcript:CBG21779e.1 | CBG21779e.1 | [unknown] | |
| Transcript:CBG21779f.1 | CBG21779f.1 | [unknown] |
Other
6 CDSs
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| CDS:CBG21779a | CBG21779a | [unknown] | |
| CDS:CBG21779e | CBG21779e | [unknown] | |
| CDS:CBG21779d | CBG21779d | [unknown] | |
| CDS:CBG21779c | CBG21779c | [unknown] | |
| CDS:CBG21779b | CBG21779b | [unknown] | |
| CDS:CBG21779f | CBG21779f | [unknown] |
27 Allele
| Public Name |
|---|
| WBVar00032187 |
| WBVar00032192 |
| WBVar00032197 |
| WBVar00032202 |
| WBVar00032207 |
| WBVar00130455 |
| WBVar00130457 |
| WBVar00130456 |
| WBVar00130459 |
| WBVar00130458 |
| WBVar00130461 |
| WBVar00032152 |
| WBVar00130460 |
| WBVar00130463 |
| WBVar00130462 |
| WBVar00130465 |
| WBVar00130464 |
| WBVar00032157 |
| WBVar00130467 |
| WBVar00130466 |
| WBVar00130469 |
| WBVar00130468 |
| WBVar00032162 |
| WBVar00032167 |
| WBVar00032172 |
| WBVar00032177 |
| WBVar00032182 |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in day 9 adults of C.briggsae AF16 comparing to in day 6 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day9_vs_Day6_upregulated | |
| Transcripts that showed significantly decreased expression in day 6 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day6_vs_Day1_downregulated |
1 Expression Patterns
| Remark | Reporter Gene | Primary Identifier | Pattern | Subcellular Localization |
|---|---|---|---|---|
| Cbr-tag-60, TACCATTTGTCGGCAAGCGAGGCACGCGAACGTCTTCGCATGAAGAACCGAAAACATCAT, WBGene00040471 | Expr1063935 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012 |
