WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032773 Gene Name  CBG11687
Sequence Name  ? CBG11687 Organism  Caenorhabditis briggsae
Automated Description  Is affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domain: Tetratricopeptide-like helical domain superfamily. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11687.2 CBG11687.2   [unknown]
Transcript:CBG11687.1 CBG11687.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11687 CBG11687   [unknown]

0 RNAi Result

88 Allele

Public Name
WBVar00137548
WBVar00137547
WBVar00137549
WBVar00137551
WBVar00137550
WBVar00137552
cbp40296
cbp40297
cbp40298
cbp40299
cbp40294
cbp40295
cbp40300
cbp40149
cbp40150
cbp40151
cbp40148
cbp40160
cbp40156
cbp40157
cbp40158
cbp40159
cbp40152
cbp40153
cbp40154
cbp40155
WBVar00043622
WBVar00043617
WBVar00117328
WBVar00117327

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in Cbr-spr-4(gu163) comparing to in AF16. DESeq2, FDR < 0.05. WBPaper00059178:Cbr-spr-4(gu163)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region