WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034384 Gene Name  Cbr-che-2
Sequence Name  ? CBG13647 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: WD40/YVTN repeat-like-containing domain superfamily; WD domain, G-beta repeat; WD40-repeat-containing domain superfamily; and WD40 repeat. Is an ortholog of C. elegans che-2. In C. elegans, che-2 is involved in several processes, including dauer larval development; negative regulation of transforming growth factor beta receptor signaling pathway; and positive regulation of locomotion involved in locomotory behavior. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13647a.1 CBG13647a.1   [unknown]
Transcript:CBG13647b.1 CBG13647b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13647b CBG13647b   [unknown]
CDS:CBG13647a CBG13647a   [unknown]

0 RNAi Result

33 Allele

Public Name
WBVar00137757
WBVar00137756
WBVar00137759
WBVar00137758
WBVar00137760
WBVar00137762
WBVar00137761
WBVar00137763
WBVar00015632
WBVar00015627
WBVar00015622
WBVar00015617
WBVar00015612
WBVar00015607
WBVar00015602
WBVar00120210
WBVar00120211
WBVar00120212
WBVar00120213
WBVar00120214
WBVar00120215
WBVar00120216
WBVar00120217
WBVar00120218
WBVar00120219
WBVar00120204
WBVar00120205
WBVar00120206
WBVar00120207
WBVar00120208

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-che-2, GGATGTCCGCCAAGCGTTACAAGTGGTCCTAACTGGAAAATTAGCAGATGCTGATACGAT, WBGene00034384   Expr1063188 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region