WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00036383 Gene Name  Cbr-otub-3
Sequence Name  ? CBG16450 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Papain-like cysteine peptidase superfamily; OTU-like cysteine protease; and OTU domain. Is an ortholog of C. elegans otub-3. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG16450b.1 CBG16450b.1   [unknown]
Transcript:CBG16450a.1 CBG16450a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG16450b CBG16450b   [unknown]
CDS:CBG16450a CBG16450a   [unknown]

0 RNAi Result

6 Allele

Public Name
WBVar00138370
WBVar00138372
WBVar00138371
WBVar00138367
WBVar00138369
WBVar00138368

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG16450, GCGTTTGGGGTGGAGAGCTCGAGTTGACAGCCATTTCACAGCACTATAAGAAGGTTATTC, WBGene00036383   Expr1067508 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region