Genomics
3 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:CBG03011a.1 | CBG03011a.1 | [unknown] | |
| Transcript:CBG03011b.1 | CBG03011b.1 | [unknown] | |
| Transcript:CBG03011c.1 | CBG03011c.1 | [unknown] |
Other
3 CDSs
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| CDS:CBG03011c | CBG03011c | [unknown] | |
| CDS:CBG03011a | CBG03011a | [unknown] | |
| CDS:CBG03011b | CBG03011b | [unknown] |
35 Allele
| Public Name |
|---|
| WBVar00136027 |
| WBVar00136028 |
| WBVar00141817 |
| WBVar00141818 |
| WBVar00141819 |
| WBVar00141821 |
| WBVar00141822 |
| WBVar00141823 |
| WBVar00141820 |
| WBVar00107987 |
| WBVar00107986 |
| WBVar00107985 |
| WBVar00107984 |
| WBVar00107983 |
| WBVar00107982 |
| WBVar00107981 |
| WBVar00107980 |
| WBVar00107979 |
| WBVar00107978 |
| WBVar00107977 |
| WBVar00107990 |
| WBVar00107998 |
| WBVar00107997 |
| WBVar00107996 |
| WBVar00107995 |
| WBVar00107994 |
| WBVar00107993 |
| WBVar00107992 |
| WBVar00107991 |
| WBVar00107989 |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in day 9 adults of C.briggsae AF16 comparing to in day 6 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day9_vs_Day6_upregulated | |
| Transcripts that showed significantly decreased expression in day 6 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day6_vs_Day1_downregulated |
1 Expression Patterns
| Remark | Reporter Gene | Primary Identifier | Pattern | Subcellular Localization |
|---|---|---|---|---|
| Cbr-mpz-1, ACGATGGACGGCTGAAACCTGGAGATCAAGTTCTAGAAGTAAATGGAACGTCGTTAAGAG, WBGene00025957 | Expr1063159 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012 |
