WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110423 Genotype  Pmyo-2::abu-6 (RNAi)
Phenotype Remark  transgenic abu-6(RNAi) causes poor disruption of bacteria by the pharyngeal grinder. Bacteria accumulate in the corpus and are poorly disrupted by the grinder, resulting in the presence of intact bacteria in the anterior intestine. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors generated transgenic animals in which pharyngeal muscle cells expressed both the sense and anti-sense strands of abu-6.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000029 abu-6 C03A7.7 Caenorhabditis elegans
WBGene00000030 abu-7 C03A7.8 Caenorhabditis elegans
WBGene00000031 abu-8 C03A7.14 Caenorhabditis elegans
WBGene00004099 abu-15 C03A7.4 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03A7.4 C03A7.4 1167   V: 5158623-5158847
CDS:C03A7.7 C03A7.7 1167   V: 5160678-5161619
CDS:C03A7.8 C03A7.8 1317   V: 5163396-5164487
CDS:C03A7.14 C03A7.14 1338   V: 5193139-5194251

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0001281 stuffed pharynx Pharynx becomes clogged with food. In C. elegans, this is often a result of pharyngeal pumping defects.
WBPhenotype:0002241 feeding reduced Animals consume less food than control animals

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00045960

0 Strain