WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077712 Phenotype Remark  RNAi alters phosphatidylserine (PS) distribution in the membrane of C. elegans germ cells so that PS staining was observed on the surface of many normal germ cells. In wild-type C. elegans, no PS staining was observed on the surface of normal germ cells.
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. Authors state that the tat-1 RNAi construct was made by polymerase chain reaction (PCR) amplification of 310 bp of the tat-1 coding region, but dont specify which portion.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013034 tat-1 Y49E10.11 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.11a Y49E10.11a 3420   III: 12399363-12399460
CDS:Y49E10.11b Y49E10.11b 3270   III: 12404132-12404204
CDS:Y49E10.11c Y49E10.11c 3579   III: 12401682-12402063

1 Laboratories

Primary Identifier
CU

1 Phenotype

Identifier Name Description
WBPhenotype:0002178 plasma membrane leaflet composition variant Any variation in the components that make up either of the two leaflets of the semipermeable bilayer surrounding a cell that separates the cell from its external environment compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031830

1 Strain

WormBase ID
WBStrain00000001