WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097637 Phenotype Remark  Gonads from gck-1(RNAi) animals had little to no discernable rachis and the proximal ends were filled with dozens of small germ cells
Remark  (Figure 1B) gck-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001526 gck-1 T19A5.2 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19A5.2d T19A5.2d 1917   V: 8949658-8949690
CDS:T19A5.2e T19A5.2e 1902   V: 8951431-8951448
CDS:T19A5.2h T19A5.2h 1899   V: 8951431-8951448
CDS:T19A5.2a T19A5.2a 1962   V: 8947811-8947888
CDS:T19A5.2b T19A5.2b 2412   V: 8948708-8949235
CDS:T19A5.2c T19A5.2c 2409   V: 8948708-8949235
CDS:T19A5.2f T19A5.2f 1959   V: 8947811-8947888
CDS:T19A5.2g T19A5.2g 1914   V: 8949658-8949690

1 Laboratories

Primary Identifier
JS

2 Phenotype

Identifier Name Description
WBPhenotype:0001033 proximal germ cell proliferation variant Any variation in the spatial pattern of proliferation and differentiation in the germ line compared to control. In C. elegans, this refers to an ectopic mass of proliferating germ cells that occupies the proximal adult germ line, a region normally occupied by gametes.
WBPhenotype:0001940 rachis morphology variant Any variation in the form, structure or composition of the nucleus-free core of germ line cytoplasm in the gonad compared to control animals. In the C. elegans germline, nuclei exiting mitosis and entering meiosis are arranged along the cortex of the germline, partially enclosed by cellular membrane, forming a nucleus-free core of germline cytoplasm, called the rachis.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035301

1 Strain

WormBase ID
WBStrain00000001