WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101438 Genotype  rde-1(ne219)/+; qIs56 [lag-2::GFP] (marker for the distal tip cell)
Phenotype Remark  pop-1(RNAi) results in 95% males with no distal tip cells, as indicated by lag-2::GFP Remark  (Table 2, Table 3, Figure 5F) zygotic pop-1 RNAi (see treatment details). Authors report using genomic sequence of gene as template DNA for dsRNA sequence. Entire genomic sequence used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004077 pop-1 W10C8.2 Caenorhabditis elegans
WBGene00220126 W10C8.17 W10C8.17 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10C8.2 W10C8.2 1317   I: 2823468-2823937

1 Laboratories

Primary Identifier
JK

3 Phenotype

Identifier Name Description
WBPhenotype:0001968 somatic gonad precursor symmetrical sisters All somatic gonad precursor (SGP) daughters adopt a proximal fate resulting in an increase in the number of AC precursor cells at the expense of distal tip cells (DTC), which are thereby absent.
WBPhenotype:0001962 missing distal tip cells Animals produce less distal tip cells compared to controls.
WBPhenotype:0002189 extra linker cells Animals produce an excess number of linker cells compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005116

0 Strain