WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101439 Genotype  rde-1(ne219)/+; qIs56 [lag-2::GFP] (marker for the linker cell in males)
Phenotype Remark  pop-1(RNAi) results in no linker cell migration, resulting in a failure of gonad elongation and a severely malformed male gonad. Remark  (Figure 5E,F) zygotic pop-1 RNAi (see treatment details). Authors report using genomic sequence of gene as template DNA for dsRNA sequence. Entire genomic sequence used for curation.
Paste the following link
Lists
This RNAi isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004077 pop-1 W10C8.2 Caenorhabditis elegans
WBGene00220126 W10C8.17 W10C8.17 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10C8.2 W10C8.2 1317   I: 2823468-2823937

1 Laboratories

Primary Identifier
JK

2 Phenotype

Identifier Name Description
WBPhenotype:0001357 male gonad morphology variant Variations in the form or composition of a specialized tissue of the reproductive tract that produces the male gametes compared to control (Wormatlas).
WBPhenotype:0001511 linker cell migration variant Variations in the stereotypical migration pattern of the linker cell in a developing male compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005116

0 Strain