WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084010 Genotype  ref-1(mu220) lag-2::gfp
Phenotype Remark  Expression is usually not seen in wild-type ABa descendants activated by the second Notch interaction. These descendants however often express the lag-2::gfp transgene when the ref-1 family is depleted. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

6 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001964 hlh-25 C17C3.7 Caenorhabditis elegans
WBGene00001965 hlh-26 C17C3.8 Caenorhabditis elegans
WBGene00001966 hlh-27 C17C3.10 Caenorhabditis elegans
WBGene00001967 hlh-28 F31A3.2 Caenorhabditis elegans
WBGene00001968 hlh-29 F31A3.4 Caenorhabditis elegans
WBGene00219272 C17C3.24 C17C3.24 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17C3.8 C17C3.8 633   II: 5532979-5533255
CDS:C17C3.10 C17C3.10 807   II: 5539300-5539717
CDS:F31A3.2 F31A3.2 720   X: 17551057-17551226
CDS:C17C3.7 C17C3.7 807   II: 5535240-5535397
CDS:F31A3.4 F31A3.4 720   X: 17547817-17548141

1 Laboratories

Primary Identifier
JJ

1 Phenotype

Identifier Name Description
WBPhenotype:0001276 ectopic expression transgene Any variation in the cellular expression of a gene product produced by exogenous DNA that has been introduced into the organism such that it now expresses in cells/tissues not seen when compared to the expression of that gene product in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025235

0 Strain