WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077670 Genotype  rrf-3(pk1426)
Phenotype Remark  Junctional actin is less robust and actin filaments are perturbed as circumferential actin bundles cluster abnormally. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013683 zoo-1 Y105E8A.26 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.26a Y105E8A.26a 3492   I: 14529532-14529627
CDS:Y105E8A.26b Y105E8A.26b 3375   I: 14529532-14529627
CDS:Y105E8A.26c Y105E8A.26c 3396   I: 14531977-14532030
CDS:Y105E8A.26d Y105E8A.26d 3120   I: 14536999-14537001

1 Laboratories

Primary Identifier
SU

2 Phenotype

Identifier Name Description
WBPhenotype:0001587 actin organization biogenesis phenotype Animals exhibit variations in the formation and/or arrangement of actin, an abundant cytoskeletal protein in most cells, often linked to the plasma membrane and concentrated at cell junctions compared to control (Wormatlas).
WBPhenotype:0001657 cell junction variant Animals exhibit variations in the specialized region of connection between two cells or between a cell and the extracellular matrix compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032115

0 Strain