WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065152 Genotype  hsp-4::GFP
Phenotype Remark  ER calcium homeostasis defect is greater than that seen with sca-1 alone. Remark  ER calcium homeostasis as judged in intestinal cells by quantifying the unfolded protein response(UPR) using hsp-4::GFP induction as a read-out. Disruption of ER calcium homeostasis triggers the UPR
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004736 sca-1 K11D9.2 Caenorhabditis elegans
WBGene00021910 stim-1 Y55B1BM.1 Caenorhabditis elegans
WBGene00194856 K11D9.5 K11D9.5 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55B1BM.1a Y55B1BM.1a 1593   III: 408418-408574
CDS:K11D9.2b K11D9.2b 3015   III: 10812323-10812354
CDS:K11D9.2a K11D9.2a 3180   III: 10812951-10813253
CDS:K11D9.2c K11D9.2c 2799   III: 10812951-10813253
CDS:Y55B1BM.1b Y55B1BM.1b 1533   III: 408418-408574
CDS:Y55B1BM.1c Y55B1BM.1c 1188   III: 410531-410645

1 Laboratories

Primary Identifier
VP

1 Phenotype

Identifier Name Description
WBPhenotype:0001352 endoplasmic reticulum metabolism variant Variations in the chemical reactions and pathways of the endoplasmic reticulum compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028479

0 Strain