WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087188 Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021921 rbm-39 Y55F3AM.3 Caenorhabditis elegans
WBGene00021922 atg-3 Y55F3AM.4 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.4a Y55F3AM.4a 918   IV: 1010512-1010802
CDS:Y55F3AM.3a Y55F3AM.3a 1743   IV: 1012788-1012850
CDS:Y55F3AM.4b Y55F3AM.4b 291   IV: 1012141-1012431

1 Laboratories

Primary Identifier
GR

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001779 miRNA expression variant Variations in the biogenesis or stability of the microRNA class of molecules compared to control. In C. elegans these molecules are endogenous single-stranded regulatory molecules, 19-25 nucleotides long, with the potential to arise from hairpin, foldback, structures from their primary transcripts.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031224

0 Strain