WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087186 Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.. Figure 1 names the targeted sequence as F56B3.4 and the locus as skr-18 (which has sequence name F56B3.12 as of WS227); used skr-18/F56B3.12 for curation
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004824 F56B3.4 F56B3.4 Caenorhabditis elegans
WBGene00018935 skr-18 F56B3.12 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56B3.4a F56B3.4a 1899   IV: 786324-786479
CDS:F56B3.4b F56B3.4b 1563   IV: 786455-786479
CDS:F56B3.12 F56B3.12 552   IV: 794752-795259

1 Laboratories

Primary Identifier
GR

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001779 miRNA expression variant Variations in the biogenesis or stability of the microRNA class of molecules compared to control. In C. elegans these molecules are endogenous single-stranded regulatory molecules, 19-25 nucleotides long, with the potential to arise from hairpin, foldback, structures from their primary transcripts.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031224

0 Strain